Probe details

Copr60

Accession no. pB-3952
Full name (Alm et al.) S-St-xxxx-0060-a-A-18
Categories animal and human associated microbiota
intestinal microbiota
Specificity Coprococcus sp. Strain L2-50
Taxonomy Coprococcus; Lachnospiraceae; Lachnospirales; Clostridia; Bacillota; Bacillati; Bacteria; cellular organisms
Sequence 5'-CAC CGA TCT TCT CTC GTT-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 60-82
Formamide -
Check specificity/coverage SILVA TestProbe
References Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces. Hold GL, Schwiertz A, Aminov RI, Blaut M, Flint HJ. Applied and environmental microbiology. 2003. Pubmed: 12839823
Remarks No formamide used hybridization temperature: 54° C.