Probe details

Bputre 698

Tested for in situ hybridization.

Accession no. pB-3912
Full name (Alm et al.) S-S-Bputre-698-a-A-20
Categories animal and human associated microbiota
intestinal microbiota
Specificity Bacteroides putredinis (Alistipes putredinis)
Taxonomy Alistipes putredinis; Alistipes; Rikenellaceae; Bacteroidales; Bacteroidia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GTT CTG TAT GAT CTC TAA GC-3'
Length [nt] 20
G+C content [%] 40
Target rRNA 16S
Position 698-723
Formamide 30
Check specificity/coverage SILVA TestProbe
References Enumeration of Bacteroides species in human faeces by fluorescent in situ hybridisation combined with flow cytometry using 16S rRNA probes. Rigottier-Gois L, Rochet V, Garrec N, Suau A, Doré J. Systematic and applied microbiology. 2003. Pubmed: 12747418
Remarks -