Probe details

Bfrag 998

Tested for in situ hybridization.

Accession no. pB-3893
Full name (Alm et al.) S-S-Bfrag-0998-a-A-20
Categories animal and human associated microbiota
intestinal microbiota
Specificity Bacteroides fragilis
Taxonomy Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GTT TCC ACA TCA TTC CAC TG-3'
Length [nt] 20
G+C content [%] 45
Target rRNA 16S
Position 1-19
Formamide 30
Check specificity/coverage SILVA TestProbe
References Enumeration of Bacteroides species in human faeces by fluorescent in situ hybridisation combined with flow cytometry using 16S rRNA probes. Rigottier-Gois L, Rochet V, Garrec N, Suau A, Doré J. Systematic and applied microbiology. 2003. Pubmed: 12747418
Remarks -