Tested for in situ hybridization.
| Accession no. | pB-3891 |
| Full name (Alm et al.) | S-*-Cvir-1414-a-A-18 |
| Categories |
animal and human associated microbiota intestinal microbiota |
| Specificity | Clostridium viride cluster |
| Taxonomy | [Clostridium] viride; Oscillospiraceae incertae sedis; Oscillospiraceae; Eubacteriales; Clostridia; Bacillota; Bacillati; Bacteria; cellular organisms |
| Sequence | 5'-GGG TGT TCC CGR CTC TCA-3' |
| Length [nt] | 18 |
| G+C content [%] | 61 |
| Target rRNA | 16S |
| Position | 1414-1431 |
| Formamide | 30 |
| Check specificity/coverage |
SILVA TestProbe |
| References |
Design and validation of 16S rRNA probes to enumerate members of the Clostridium leptum subgroup in human faecal microbiota. Lay C, Sutren M, Rochet V, Saunier K, Doré J, Rigottier-Gois L. Environmental microbiology. 2005. Pubmed: 15946290 |
| Remarks | 3rd competitor: GGGTCCCCCCGRCTCTCA |