Probe details

A693r

To be used as primer.

Accession no. pB-3840
Full name (Alm et al.) S-D-Arch-0693-a-A-15
Categories primer
Specificity Archaea
Taxonomy Archaea; cellular organisms
Sequence 5'-GGA TTA CAR GAT TTC-3'
Length [nt] 15
G+C content [%] 33
Target rRNA 16S
Position 693-707
Direction Reverse primer
Tm 35.50
Check specificity/coverage SILVA TestProbe
References Evaluations of different hypervariable regions of archaeal 16S rRNA genes in profiling of methanogens by Archaea-specific PCR and denaturing gradient gel electrophoresis. Yu Z, García-González R, Schanbacher FL, Morrison M. Applied and environmental microbiology. 2008. Pubmed: 18083874
Remarks -

Coverage

Mismatches Archaea Bacteria Eukaryota
0 21.5000 - -
1 59.2000 - -