Probe details

533R

To be used as primer.

Accession no. pB-3803
Full name (Alm et al.) S-D-Bact-0515-a-A-19
Categories primer
Specificity Bacteria
Taxonomy Bacteria; cellular organisms
Sequence 5'-TTA CCG CGG CTG CTG GCA C-3'
Length [nt] 19
G+C content [%] 68
Target rRNA 16S
Position 515-533
Direction Reverse primer
Tm 58.00
Check specificity/coverage SILVA TestProbe
References Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing. Huse SM, Dethlefsen L, Huber JA, Mark Welch D, Welch DM, Relman DA, Sogin ML. PLoS genetics. 2008. Pubmed: 19023400
Remarks -

Coverage

Mismatches Archaea Bacteria Eukaryota
0 1.5945 95.4024 88.7622
1 53.6622 98.3576 93.5434