Probe details

1100R

To be used as primer.

Accession no. pB-3780
Full name (Alm et al.) S-D-Bact-1100-a-A-15
Categories primer
Specificity Bacteria
Taxonomy Bacteria; cellular organisms
Sequence 5'-GGG TTN CGN TCG TTG-3'
Length [nt] 15
G+C content [%] 53
Target rRNA 16S
Position 1100-1114
Direction Reverse primer
Tm 45.00
Check specificity/coverage SILVA TestProbe
References Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP). Dowd SE, Callaway TR, Wolcott RD, Sun Y, McKeehan T, Hagevoort RG, Edrington TS. BMC microbiology. 2008. Pubmed: 18652685
Remarks -

Coverage

Mismatches Archaea Bacteria Eukaryota
0 0.1154 80.5124 -
1 54.6797 98.6880 0.0458