Probe details

530F

To be used as primer.

Accession no. pB-3779
Full name (Alm et al.) S-D-Bact-0515-a-S-16
Categories primer
Specificity Bacteria
Taxonomy Bacteria; cellular organisms
Sequence 5'-GTG CCA GCM GCN GCG G-3'
Length [nt] 16
G+C content [%] 75
Target rRNA 16S
Position 515-530
Direction Forward primer
Tm 57.50
Check specificity/coverage SILVA TestProbe
References Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP). Dowd SE, Callaway TR, Wolcott RD, Sun Y, McKeehan T, Hagevoort RG, Edrington TS. BMC microbiology. 2008. Pubmed: 18652685
Remarks -

Coverage

Mismatches Archaea Bacteria Eukaryota
0 54.8813 96.9094 94.0167
1 96.7231 98.6869 97.7452