Probe details

Arch516F

To be used as primer.

Accession no. pB-3748
Full name (Alm et al.) S-D-Arch-0516-a-S-25
Categories primer
Specificity Archaea
Taxonomy Archaea; cellular organisms
Sequence 5'-TGY CAG CCG CCG CGG TAA HAC CVG C-3'
Length [nt] 25
G+C content [%] 64
Target rRNA 16S
Position 516-540
Direction Forward primer
Tm 67.00
Check specificity/coverage SILVA TestProbe
References Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes. Takai K, Horikoshi K. Applied and environmental microbiology. 2000. Pubmed: 11055964
Remarks -

Coverage

Mismatches Archaea Bacteria Eukaryota
0 81.5003 - 0.0083
1 95.2822 0.0004 1.2250