Probe details

ClaR1

Tested for in situ hybridization.

Accession no. pB-362
Full name (Alm et al.) -
Categories bacteria of medical or hygienical relevance
Specificity clarithromycin resistant Helicobacter pylori
Taxonomy Helicobacter pylori; Helicobacter; Helicobacteraceae; Campylobacterales; Epsilonproteobacteria; Campylobacterota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CGG GGT CTT CCC GTC TT-3'
Length [nt] 17
G+C content [%] 65
Target rRNA 23S
Position 2136-2152
Formamide 30
Check specificity/coverage SILVA TestProbe
References Rapid and specific detection of Helicobacter pylori macrolide resistance in gastric tissue by fluorescent in situ hybridisation. Trebesius K, Panthel K, Strobel S, Vogt K, Faller G, Kirchner T, Kist M, Heesemann J, Haas R. Gut. 2000. Pubmed: 10764702
Remarks use in combination with ClaR2, ClaR3, ClaWT