Probe details

Bac1080

Tested for in situ hybridization.

Accession no. pB-2683
Full name (Alm et al.) S-S-Bac-1080-a-18
Categories
Specificity Clones in order Bacteroidales, phylum Bacteroidetes
Taxonomy Bacteroidales; Bacteroidia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GCA CTT AAG CCG ACA CCT-3'
Length [nt] 18
G+C content [%] 56
Target rRNA 16S
Position 1080-1097
Formamide 20
Check specificity/coverage SILVA TestProbe
References Quantitative fluorescence in situ hybridization of microbial communities in the rumens of cattle fed different diets. Kong Y, He M, McAlister T, Seviour R, Forster R. Applied and environmental microbiology. 2010. Pubmed: 20802069
Remarks -