Probe details

OPT1169

Tested for in situ hybridization.

Accession no. pB-2648
Full name (Alm et al.) -
Categories
Specificity Opitutus spp. and uncultured relatives
Taxonomy Opitutus; Opitutaceae; Opitutales; Opitutia; Verrucomicrobiota; PVC group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CCC ACC TTC CCA CCC TCA-3'
Length [nt] 18
G+C content [%] 67
Target rRNA 16S
Position 1169-1186
Formamide 35
Check specificity/coverage SILVA TestProbe
References Development of a 16S rRNA-targeted probe set for Verrucomicrobia and its application for fluorescence in situ hybridization in a humic lake. Arnds J, Knittel K, Buck U, Winkel M, Amann R. Systematic and applied microbiology. 2010. Pubmed: 20226613
Remarks -