Probe details

DEN220a

Tested for in situ hybridization.

Accession no. pB-2547
Full name (Alm et al.) -
Categories
Specificity Acetate-denitrifying cluster and some members of the Rhodocyclaceae family
Taxonomy Rhodocyclaceae; Rhodocyclales; Betaproteobacteria; Pseudomonadota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-TCG GCC GCT CCG GAA GC-3'
Length [nt] 17
G+C content [%] 76
Target rRNA 16S
Position 220-236
Formamide 45
Check specificity/coverage SILVA TestProbe
References Investigation of an acetate-fed denitrifying microbial community by stable isotope probing, full-cycle rRNA analysis, and fluorescent in situ hybridization-microautoradiography. Ginige MP, Keller J, Blackall LL. Applied and environmental microbiology. 2005. Pubmed: 16332863
Remarks -