Probe details

VIS1-575

Tested for in situ hybridization.

Accession no. pB-2538
Full name (Alm et al.) -
Categories
Specificity marine uncultured Flavobacteria clade VIS1
Taxonomy Flavobacteriia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CTT AAC AAA CAG CCT GCG GAC C-3'
Length [nt] 22
G+C content [%] 55
Target rRNA 16S
Position 575-596
Formamide 35
Check specificity/coverage SILVA TestProbe
References Distinct flavobacterial communities in contrasting water masses of the north Atlantic Ocean. Gómez-Pereira PR, Fuchs BM, Alonso C, Oliver MJ, van Beusekom JE, Amann R. The ISME journal. 2010. Pubmed: 20054356
Remarks -