Probe details

MS5

Accession no. pB-228
Full name (Alm et al.) -
Categories methanogenic archaea
Specificity Methanothrix soehngenii, Methanosaeta concilii, Methanothrix sp. strain CALS-1, Methanothrix sp. strain PTT, Methanosaeta thermoacetophila
Taxonomy Methanothrix; Methanotrichaceae; Methanotrichales; Methanomicrobia; Stenosarchaea group; Methanobacteriota; Methanobacteriati; Archaea; cellular organisms
Sequence 5'-CGA CAA CGG TCG CAC CGT GGC C-3'
Length [nt] 22
G+C content [%] 73
Target rRNA 16S
Position 1-21
Formamide -
Check specificity/coverage SILVA TestProbe
References Differentiation of methanosaeta concilii and methanosarcina barkeri in anaerobic mesophilic granular sludge by fluorescent In situ hybridization and confocal scanning laser microscopy Rocheleau S, Greer CW, Lawrence JR, Cantin C, Laramee L, Guiot SR. Applied and environmental microbiology. 1999. Pubmed: 10224023
Remarks wrong sequence in reference (should be reverse complementary)