| Accession no. |
pB-209 |
| Full name (Alm et al.) |
- |
| Categories |
methylotrophic bacteria
|
| Specificity |
Methylocella palustris+Methylocapsa acidiphila |
| Taxonomy |
Beijerinckiaceae;
Hyphomicrobiales;
Alphaproteobacteria;
Pseudomonadota;
Pseudomonadati;
Bacteria;
cellular organisms
|
| Sequence |
5'-TCT TTC TCC TTG CGG ACG-3' |
| Length [nt] |
18 |
| G+C content [%] |
56 |
| Target rRNA |
16S |
| Position |
181-198 |
| Formamide |
- |
| Check specificity/coverage |
SILVA TestProbe
|
| References |
Detection and enumeration of methanotrophs in acidic Sphagnum peat by 16S rRNA fluorescence in situ hybridization, including the use of newly developed oligonucleotide probes for Methylocella palustris. Dedysh SN, Derakshani M, Liesack W. Applied and environmental microbiology. 2001. Pubmed: 11571193
Differential detection of type II methanotrophic bacteria in acidic peatlands using newly developed 16S rRNA-targeted fluorescent oligonucleotide probes. Dedysh SN, Dunfield PF, Derakshani M, Stubner S, Heyer J, Liesack W. FEMS microbiology ecology. 2003. Pubmed: 19719661
|
| Remarks |
helper probe H158 |