Tested for in situ hybridization.
| Accession no. | pB-206 |
| Full name (Alm et al.) | - |
| Categories |
methanogenic archaea |
| Specificity | Methanococcus spp. |
| Taxonomy | Methanococcus; Methanococcaceae; Methanococcales; Methanococci; Methanomada group; Methanobacteriota; Methanobacteriati; Archaea; cellular organisms |
| Sequence | 5'-GCA ACA TAG GGC ACG GGT CT-3' |
| Length [nt] | 20 |
| G+C content [%] | 60 |
| Target rRNA | 16S |
| Position | 1109-1128 |
| Formamide | 45 |
| Check specificity/coverage |
SILVA TestProbe |
| References |
Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Raskin L, Stromley JM, Rittmann BE, Stahl DA. Applied and environmental microbiology. 1994. Pubmed: 7517128 An update and optimisation of oligonucleotide probes targeting methanogenic Archaea for use in fluorescence in situ hybridisation (FISH). Crocetti G, Murto M, Björnsson L. Journal of microbiological methods. 2006. Pubmed: 16126291 |
| Remarks | - |