Probe details

G1B

Tested for in situ hybridization.

Accession no. pB-171
Full name (Alm et al.) S-*-021Ng1-1029-a-A-18
Categories bacteria of relevance in wastewater treatment
S-oxidizing (sulfur-oxidizing) bacteria
Specificity Eikelboom type 021N group I
Taxonomy unknown
Sequence 5'-TGT GTT CGA GTT CCT TGC-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 1029-1046
Formamide 30
Check specificity/coverage SILVA TestProbe
References Phylogenetic analysis of and oligonucleotide probe development for eikelboom type 021N filamentous bacteria isolated from bulking activated sludge. Kanagawa T, Kamagata Y, Aruga S, Kohno T, Horn M, Wagner M. Applied and environmental microbiology. 2000. Pubmed: 11055962
Remarks -