| Accession no. |
pB-1566 |
| Full name (Alm et al.) |
S-Sc-aProt-0682-a-A-18 |
| Categories |
|
| Specificity |
Alphaproteobacteria from sludge anaerobic digesters |
| Taxonomy |
Alphaproteobacteria;
Pseudomonadota;
Pseudomonadati;
Bacteria;
cellular organisms
|
| Sequence |
5'-GAA TTT CAC CTC TAC ACT-3' |
| Length [nt] |
18 |
| G+C content [%] |
39 |
| Target rRNA |
16S |
| Position |
682-699 |
| Formamide |
- |
| Check specificity/coverage |
SILVA TestProbe
|
| References |
Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge. Rivière D, Desvignes V, Pelletier E, Chaussonnerie S, Guermazi S, Weissenbach J, Li T, Camacho P, Sghir A. The ISME journal. 2009. Pubmed: 19242531
|
| Remarks |
The results concerning the efficiency of the probes are unpublished so far. But the design of this probes is based on the sequences published in the referenced study. |