Tested for in situ hybridization.
Accession no. | pB-1564 |
Full name (Alm et al.) | - |
Categories | |
Specificity | Pirellula sp. strain SH1 |
Taxonomy | Pirellula; Pirellulaceae; Pirellulales; Planctomycetia; Planctomycetota; PVC group; Pseudomonadati; Bacteria; cellular organisms |
Sequence | 5'-ATG ATG GAT AAC CAC CAT GC-3' |
Length [nt] | 20 |
G+C content [%] | 45 |
Target rRNA | 16S |
Position | 454-473 |
Formamide | 30 |
Check specificity/coverage |
SILVA TestProbe |
References |
Identification of planctomycetes with order-, genus-, and strain-specific 16S rRNA-targeted probes. Gade D, Schlesner H, Glöckner FO, Amann R, Pfeiffer S, Thomm M. Microbial ecology. 2004. Pubmed: 14994173 |
Remarks | helper probes for RB454: RB433H ATTTCCTAACAACTGACAGCG RB474H CCTCTGAAGATCGGTCAAAC |