Probe details

RB454

Tested for in situ hybridization.

Accession no. pB-1564
Full name (Alm et al.) -
Categories
Specificity Pirellula sp. strain SH1
Taxonomy Pirellula; Pirellulaceae; Pirellulales; Planctomycetia; Planctomycetota; PVC group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-ATG ATG GAT AAC CAC CAT GC-3'
Length [nt] 20
G+C content [%] 45
Target rRNA 16S
Position 454-473
Formamide 30
Check specificity/coverage SILVA TestProbe
References Identification of planctomycetes with order-, genus-, and strain-specific 16S rRNA-targeted probes. Gade D, Schlesner H, Glöckner FO, Amann R, Pfeiffer S, Thomm M. Microbial ecology. 2004. Pubmed: 14994173
Remarks helper probes for RB454: RB433H ATTTCCTAACAACTGACAGCG RB474H CCTCTGAAGATCGGTCAAAC