Probe details

DF1013

Tested for in situ hybridization.

Accession no. pB-1545
Full name (Alm et al.) S-*Bact-0198-a-A-20
Categories
Specificity Defluviicoccus related organisms. some cluster III
Taxonomy Defluviicoccus; Rhodospirillaceae; Rhodospirillales; Alphaproteobacteria; Pseudomonadota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GAA CTG AAG GCT CGA GTT TC-3'
Length [nt] 20
G+C content [%] 50
Target rRNA 16S
Position 1013-1032
Formamide 35-50
Check specificity/coverage SILVA TestProbe
References Candidatus Monilibacter spp., common bulking filaments in activated sludge, are members of Cluster III Defluviicoccus. Nittami T, McIlroy S, Seviour EM, Schroeder S, Seviour RJ. Systematic and applied microbiology. 2009. Pubmed: 19679419
Remarks Use DF1013 with helper probe DF997H (CCCAAGCCGCGACGCCCA)