Probe details

DF1004

Tested for in situ hybridization.

Accession no. pB-1544
Full name (Alm et al.) S-*-Bact-1004-a-A-18
Categories
Specificity Defluviicoccus related organisms, some cluster III
Taxonomy Defluviicoccus; Rhodospirillaceae; Rhodospirillales; Alphaproteobacteria; Pseudomonadota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-TAA GTT TCC TCA AGC CGC-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 1004-1021
Formamide 35
Check specificity/coverage SILVA TestProbe
References Candidatus Monilibacter spp., common bulking filaments in activated sludge, are members of Cluster III Defluviicoccus. Nittami T, McIlroy S, Seviour EM, Schroeder S, Seviour RJ. Systematic and applied microbiology. 2009. Pubmed: 19679419
Remarks Use DF1004 probe with helper probe DF987H (GACGCCCATGTCAAGGGC)