Probe details

BKH43

Accession no. pB-1426
Full name (Alm et al.) -
Categories
Specificity Burkholderia ambifaria, B. anthina, B. cenocepacia, B. cepacia, B. multivorans, B. pyrrocinia, B. ubonensis, B. vietnamiensis, Burkholderia sp.
Taxonomy Burkholderia; Burkholderiaceae; Burkholderiales; Betaproteobacteria; Pseudomonadota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CCA AGG ATT TCT TTC CGG-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 443-460
Formamide -
Check specificity/coverage SILVA TestProbe
References 16S rRNA gene-based phylogenetic microarray for simultaneous identification of members of the genus Burkholderia. Schönmann S, Loy A, Wimmersberger C, Sobek J, Aquino C, Vandamme P, Frey B, Rehrauer H, Eberl L. Environmental microbiology. 2009. Pubmed: 19396938
Remarks this probe was removed from the final microarray version, this probe fully matches in addition the following strains: M1-K2, M1-K8, M1-K10, M1-K11, M1-K13, M1-K14, M1-K21, M1-K23, M2-K5, M2-K6, M2-K9, M2-K11, M2-K13, M2-K72, M2-K81, M3-K3,