Probe details

SPIRO

Tested for in situ hybridization.

Accession no. pB-1371
Full name (Alm et al.) -
Categories symbiotic microbes
Specificity Olavius algarvensis / O. crassitunicatus /O. loisae spirochete symbionts
Taxonomy Spirochaetales; Spirochaetia; Spirochaetota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GCT ATC CCC AAC CAA AAG-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 136-153
Formamide 30
Check specificity/coverage SILVA TestProbe
References Multiple bacterial symbionts in two species of co-occurring gutless oligochaete worms from Mediterranean sea grass sediments. Ruehland C, Blazejak A, Lott C, Loy A, Erséus C, Dubilier N. Environmental microbiology. 2008. Pubmed: 18764872
Remarks 30% FA for CARD-FISH