Probe details

Sita-649

Tested for in situ hybridization.

Accession no. pB-1164
Full name (Alm et al.) -
Categories bacteria of relevance in wastewater treatment
Specificity Candidatus Sphaeronema italicum
Taxonomy Sphaeronema; Sphaeronematidae; Criconematoidea; Tylenchomorpha; Tylenchina; Rhabditida; Chromadorea; Nematoda; Ecdysozoa; Protostomia; Bilateria; Eumetazoa; Metazoa; Opisthokonta; Eukaryota; cellular organisms
Sequence 5'-CCW CTC CCG GAC YCC AGC-3'
Length [nt] 18
G+C content [%] 72
Target rRNA 16S
Position 649-666
Formamide 50
Check specificity/coverage SILVA TestProbe
References Filamentous Alphaproteobacteria associated with bulking in industrial wastewater treatment plants. Levantesi C, Beimfohr C, Geurkink B, Rossetti S, Thelen K, Krooneman J, Snaidr J, van der Waarde J, Tandoi V. Systematic and applied microbiology. 2004. Pubmed: 15612630
Remarks Competitor to exclude PPx3-1428