Probe details

MSMX860

Tested for in situ hybridization.

Accession no. pB-1147
Full name (Alm et al.) -
Categories methanogenic archaea
Specificity Methanosarcinales (all Methanosarcina and Methanosaeta)
Taxonomy Methanosarcinales; Methanomicrobia; Stenosarchaea group; Methanobacteriota; Methanobacteriati; Archaea; cellular organisms
Sequence 5'-GGC TCG CTT CAC GGC TTC CCT-3'
Length [nt] 21
G+C content [%] 67
Target rRNA 16S
Position 860-880
Formamide 45
Check specificity/coverage SILVA TestProbe
References Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Raskin L, Stromley JM, Rittmann BE, Stahl DA. Applied and environmental microbiology. 1994. Pubmed: 7517128
Remarks -