Tested for in situ hybridization.
| Accession no. | pB-1142 |
| Full name (Alm et al.) | - |
| Categories |
methanogenic archaea |
| Specificity | Methanocaldococcaceae(+some Methanococcaceae) |
| Taxonomy | Methanocaldococcaceae; Methanococcales; Methanococci; Methanomada group; Methanobacteriota; Methanobacteriati; Archaea; cellular organisms |
| Sequence | 5'-GGC TGC TGG CAC CGG ACT TGC CCA-3' |
| Length [nt] | 24 |
| G+C content [%] | 71 |
| Target rRNA | 16S |
| Position | 504-527 |
| Formamide | 55 |
| Check specificity/coverage |
SILVA TestProbe |
| References |
An update and optimisation of oligonucleotide probes targeting methanogenic Archaea for use in fluorescence in situ hybridisation (FISH). Crocetti G, Murto M, Björnsson L. Journal of microbiological methods. 2006. Pubmed: 16126291 |
| Remarks | - |