Probe details

Chlc190

Tested for in situ hybridization.

Accession no. pB-1119
Full name (Alm et al.) S-S-Chlctf-0190-a-A-22
Categories phototrophic bacteria
Specificity Chlorobium clathratiforme (DSM 5477), strain 4DE and clones 810, 827, 849 Lake Cadagno.
Taxonomy Pelodictyon clathratiforme; Pelodictyon; Chlorobium/Pelodictyon group; Chlorobiaceae; Chlorobiales; Chlorobiia; Chlorobiota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GGC AGA ACA ACC ATG CGA TTG T-3'
Length [nt] 22
G+C content [%] 50
Target rRNA 16S
Position 190-211
Formamide 20
Check specificity/coverage SILVA TestProbe
References Long-term population dynamics of phototrophic sulfur bacteria in the chemocline of Lake Cadagno, Switzerland. Tonolla M, Peduzzi R, Hahn D. Applied and environmental microbiology. 2005. Pubmed: 16000760
Remarks -