Probe details

Aph1180

Tested for in situ hybridization.

Accession no. pB-1080
Full name (Alm et al.) S-G-Aph-1180-a-A-18
Categories symbiotic microbes
Specificity Candidatus Amoebophilus asiaticus
Taxonomy Candidatus Amoebophilus asiaticus; Candidatus Amoebophilus; Amoebophilaceae; Cytophagales; Cytophagia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CTG ACC TCA TCC CCT CCT-3'
Length [nt] 18
G+C content [%] 61
Target rRNA 16S
Position 1180-1197
Formamide 20
Check specificity/coverage SILVA TestProbe
References Members of the Cytophaga-Flavobacterium-Bacteroides phylum as intracellular bacteria of acanthamoebae: proposal of 'Candidatus Amoebophilus asiaticus'. Horn M, Harzenetter MD, Linner T, Schmid EN, Müller KD, Michel R, Wagner M. Environmental microbiology. 2001. Pubmed: 11553234
Remarks -