| Accession no. |
pB-103 |
| Full name (Alm et al.) |
- |
| Categories |
bacteria of medical or hygienical relevance
|
| Specificity |
Enterococcus casseliflavus, E. flavescens |
| Taxonomy |
Enterococcus casseliflavus;
Enterococcus;
Enterococcaceae;
Lactobacillales;
Bacilli;
Bacillota;
Bacillati;
Bacteria;
cellular organisms
|
| Sequence |
5'-GGA TGT TAC GTC TGC GTG-3' |
| Length [nt] |
18 |
| G+C content [%] |
56 |
| Target rRNA |
23S |
| Position |
142-159 |
| Formamide |
- |
| Check specificity/coverage |
SILVA TestProbe
|
| References |
A nested array of rRNA targeted probes for the detection and identification of enterococci by reverse hybridization. Behr T, Koob C, Schedl M, Mehlen A, Meier H, Knopp D, Frahm E, Obst U, Schleifer K, Niessner R, Ludwig W. Systematic and applied microbiology. 2000. Pubmed: 11249027
|
| Remarks |
Suffix “i” in the probe name indicates that this probe can not be used to detect 23S rRNA. The reverse complementary version of this probe targets 23S rRNA. |