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Probes/primers found for taxon: Burkholderia
Hit typeShort nameName (Alm et al.)Specificity
ExactAlsym16SS-G-Burk-0642-a-A-19Burkholderia (Alydidae gut symbionts)
ExactBKH109Burkholderia bryophila 1S18 (T) (AM489499), B. caledonica (T) (AF215704), B. phenazinium, Burkholderia sp.
ExactBKH110Burkholderia sp. NAP1 (AF361021)
ExactBKH111Burkholderia sp. NAP1 (AF361021)
ExactBKH112Burkholderia sp. NAP1 (AF361021)
ExactBKH115Burkholderia sp. 418 (AY580068 amp AY520839)
ExactBKH116Burkholderia sp. UCT 29 (AY178062), Burkholderia sp. Cses4 (AY178063), L2-K30
ExactBKH118Burkholderia sp.
ExactBKH119Burkholderia sp., L19-K2, L19-K31
ExactBKH120Burkholderia sp.
ExactBKH121Burkholderia sp. B6 (AJ605717)
ExactBKH122Burkholderia sp. B6 (AJ605717)
ExactBKH123Burkholderia sp. B6 (AJ605717)
ExactBKH124Burkholderia sp. B6 (AJ605717)
ExactBKH128Burkholderia sp. BR3437 (AY773189), Burkholderia sp. BR3464 (AY773194)
ExactBKH129Burkholderia sp. BR3437 (AY773189), Burkholderia sp. BR3464 (AY773194)
ExactBKH130Burkholderia nodosa R-22632 amp R-25486 (AM284970 amp AM284972), Burkholderia sp. Br3461 (AY773192 amp AY533861), Burkholderia sp. BR3470 (AY773198), Burkholderia sp. IBRC204 (DQ381722)
ExactBKH2Candidatus Burkholderia kirkii, B. glathei, M2-K3
ExactBKH21Burkholderia sp. AB119 (AF364859)
ExactBKH22Burkholderia sp.
ExactBKH24Burkholderia terrae, B. hospita, Burkholderia sp.
ExactBKH25Burkholderia sp.
ExactBKH28Burkholderia kururiensis, B. brasilensis
ExactBKH29Burkholderia kururiensis, B. brasilensis
ExactBKH30Burkholderia sp.
ExactBKH31Burkholderia sp.
ExactBKH38Burkholderia ambifaria, B. anthina, B. cenocepacia, B. cepacia, B. multivorans, B. pyrrocinia, B. stabilis, B. ubonensis, B. vietnamiensis, Burkholderia sp.
ExactBKH39Burkholderia cenocepacia, B. cepacia, B. multivorans, B. pyrrocinia, B. tropica, B. unamae, B. vietnamiensis, Burkholderia sp., M1-K8, M1-K10, M1-K11, M1-K13, M1-K14, M2-K6, M2-K81
ExactBKH42Burkholderia ambifaria, B. cepacia, B. pyrrocinia, B. stabilis, B. vietnamiensis, Burkholderia sp., M2-K5, M2-K9, M2-K11, M2-K13, M2-K72, M3-K3
ExactBKH43Burkholderia ambifaria, B. anthina, B. cenocepacia, B. cepacia, B. multivorans, B. pyrrocinia, B. ubonensis, B. vietnamiensis, Burkholderia sp.
ExactBKH45Burkholderia cenocepacia, B. cepacia, B. dolosa, B. multivorans, B. ubonensis, B. vietnamiensis, Burkholderia sp., Rhodocyclus tenuis DSM110 (D16209)
ExactBKH46Burkholderia gladioli, B. glumae, B. plantarii, Burkholderia sp.
ExactBKH47Burkholderia gladioli, B. glumae, B. plantarii, Burkholderia sp.
ExactBKH48Burkholderia andropogonis, B. glathei, B. plantarii, B. sordidicola Jm120 (DQ256491), B. tropica, Burkholderia sp., Candidatus Burkholderia nigropunctata, uncultured eubacterium WD263 (AJ292641), L1-K13,
ExactBKH49Burkholderia fungorum, Burkholderia sp., symbionts of Tetraponeri binghami and Asellus aquaticus
ExactBKH51Burkholderia fungorum, B. koreensis, B. phenazinium, B. phytofirmans, B. unamae, Burkholderia sp., symbionts of Tetraponeri binghami and Asellus aquaticus, uncultured eubacterium WD202 amp WD285 (AJ292637 amp AJ292644)
ExactBKH53Burkholderia graminis, Burkholderia sp. 54 (AY238504)
ExactBKH54Burkholderia caryophylli, B. graminis, Burkholderia sp.
ExactBKH56Burkholderia cepacia, B. phenoliruptrix (T) (AY435213), Burkholderia sp.
ExactBKH57Burkholderia cepacia, B. phenoliruptrix (T) (AY435213), Burkholderia sp.
ExactBKH60Burkholderia koreensis, B. tuberum (T) (AJ302311), Burkholderia sp., Thauera sp. O (AJ277704)
ExactBKH61Burkholderia bryophila, B. megapolitana (T) (AM489502), B. phenazinium, Burkholderia sp., L1-K48, L19-K74, L20-K81, M1-K6, M1-K7, M1-K24, M2-K4, M2-K14, M3-K2, M3-K6
ExactBKH66Burkholderia cepacia, Candidatus Burkholderia calva, Burkholderia sp.
ExactBKH67Burkholderia hospita, B. terrae, Burkholderia sp.
ExactBKH68Burkholderia phymatum (T) (AJ302312), B. hospita, B. terrae KMY01 (AB201284)
ExactBKH71Burkholderia brasilensis M130 (AJ238360), B. kururiensis, B. sacchari (T) (AF263278), Burkholderia sp.
ExactBKH72Burkholderia nodosa, B. sacchari (T) (AF263278), B. tropica, B. unamae, Burkholderia sp., L19-K13, L19-K15, L19-K20, L19-K39,
ExactBKH78Candidatus Burkholderia calva (AY277697), Burkholderia cepacia (AY512825), Burkholderia sp.
ExactBKH79Candidatus Burkholderia calva (AY277697), Candidatus Burkholderia nigropunctata (AY277698), Burkholderia cepacia (AY512825), Burkholderia sp.
ExactBKH80Candidatus Burkholderia kirkii, Candidatus Burkholderia nigropunctata (AY277698), Burkholderia cepacia (AY512825), Burkholderia sp.
ExactBKH85Candidatus Burkholderia calva (AY277697), Candidatus Burkholderia kirkii, Candidatus Burkholderia nigropunctata (AY277698), Burkholderia cepacia (AY512825), Burkholderia sp.
ExactBKH86Burkholderia bryophila 1S18 (T) (AM489499), B. glathei, Burkholderia sp., L1-K13, L2-K5, L19-K66, L19-K74, M2-K3, M2-K7, M2-K12, M3-K1, M3-K4, M3-K5, M3-K7, M3-K8, M3-K9, M3-K10, M3-K14, M3-K15
ExactBKH91Burkholderia cepacia, B. glathei, B. multivorans, Burkholderia sp.
ExactBKH92Burkholderia cenocepacia (T) (AF148556), B. cepacia, B. dolosa (T) (AF175314), B. multivorans, B. ubonensis (T) (AB030584), B. vietnamiensis, Burkholderia sp., Rhodocyclus tenuis DSM110 (D16209)
ExactBKH94Burkholderia fungorum, Burkholderia sp., symbionts of Tetraponeri binghami and Asellus aquaticus
ExactBKH95Burkholderia fungorum, Burkholderia sp., symbionts of Tetraponeri binghami and Asellus aquaticus
ExactBKH96Burkholderia bryophila 1S18 (T) (AM489499), B. caledonica (T) (AF215704), B. phenazinium, Burkholderia sp.
ExactBkhcari1Some Burkholderia (B. caribensis and B. hospita)
ExactBkhcari2Some Burkholderia (B. caribensis and B. hospita)
ExactBkmuvianSome Burkholderia (some B. cepacia, B. multivorans, and B. vietnamiensis)
ExactBurcepSome Burkholderia (B. cepacia, B. mallei, B. pseudomallei, B. vietnamiensis, B. thailandensis, B. pyrrocinia) and some Herbaspirillum
ExactBurkhoBurkholderia spp.
ExactBurkho4AMost Burkholderia
ExactBurkho4BBurkholderia caribensis and B. caryophylli
ExactBurkho4CBurkholderia glathei and B. multivorans
ExactBurkho4DMost Burkholderia
ExactMallei2Burkholderia pseudomallei and B. thailandensis
ExactMallei3Burkholderia pseudomallei and B. mallei
ExactPceBurkholderia spp.
ExactPPCBurkholderia spp., Sutterella wadsworthia
ExactSUBU1237Burkholderia spp., Sutterella spp.
SpecBcv13bBurkholderia vietnamensis, B. cepacia
SpecBkandBurkholderia andropogonis
SpecBKH1Candidatus Burkholderia kirkii
SpecBKH10Burkholderia caryophylli
SpecBKH100Burkholderia gladioli, Burkholderia sp.
SpecBKH101Burkholderia gladioli
SpecBKH103Burkholderia multivorans AU0127 (AY486372)
SpecBKH108Burkholderia xenovorans LB400 (T) (U86373), Burkholderia sp., Ralstonia sp. 1263a (AB054961) amp Ralstonia sp. JMP134 (AF139729)
SpecBKH11Burkholderia glathei, Burkholderia sp.
SpecBKH113Burkholderia plantarii (T) (U96932), uncultured bacterium clone GPT2b (AY706439)
SpecBKH117Burkholderia cepacia strain ATCC 55487 (AY741358), Burkholderia sp.
SpecBKH12Burkholderia glathei, Burkholderia sp.
SpecBKH125Burkholderia sp. 14 (AY238506)
SpecBKH126Burkholderia terrae KMY01 amp KMY02 (AB201284 amp AB201285), Burkholderia sp.
SpecBKH127Burkholderia ferrariae FeGl01 (DQ514537), bacterium strains
SpecBKH13Burkholderia glathei, Burkholderia sp.
SpecBKH14Burkholderia glathei, Burkholderia sp.
SpecBKH15Burkholderia sorididicola
SpecBKH16Burkholderia sorididicola
SpecBKH17Candidatus Burkholderia nigropunctata
SpecBKH18Candidatus Burkholderia nigropunctata
SpecBKH19Candidatus Burkholderia nigropunctata
SpecBKH20Candidatus Burkholderia nigropunctata
SpecBKH26Burkholderia phymatum STM815 (T) (AJ302312)
SpecBKH27Burkholderia phymatum STM815 (T) (AJ302312)
SpecBKH3Candidatus Burkholderia kirkii
SpecBKH32Burkholderia ambifaria (T) (AF043302)
SpecBKH33Burkholderia ambifaria (T) (AF043302)
SpecBKH34Burkholderia mallei, B. pseudomallei
SpecBKH35Burkholderia mallei, B. pseudomallei
SpecBKH36Burkholderia mallei, B. pseudomallei
SpecBKH37Burkholderia pseudomallei, B. thailandensis
SpecBKH4Candidatus Burkholderia kirkii, M2-K4, M2-K6
SpecBKH40Burkholderia mallei, B. pseudomallei
SpecBKH41Burkholderia pyrrocinia (T) (U96930)
SpecBKH5Burkholderia andropogonis
SpecBKH50Burkholderia phytofirmans amp Burkholderia sp. NAH1 (AF247815)
SpecBKH52Burkholderia xenovorans (T) (U86373)
SpecBKH55Burkholderia terricola (T) (AY040362), Burkholderia sp.
SpecBKH58Burkholderia tuberum (T) (AJ302311), Burkholderia sp.
SpecBKH59Burkholderia tuberum (T) (AJ302311), Burkholderia sp., L19-K6, L19-K12, L19-K47, L20-K36
SpecBKH6Burkholderia andropogonis
SpecBKH62Burkholderia phenazinium, Burkholderia sp.
SpecBKH63Burkholderia caribiensis, Burkholderia sp.
SpecBKH64Burkholderia caribiensis, Burkholderia sp.
SpecBKH65Burkholderia cepacia, Burkholderia sp.
SpecBKH69Burkholderia tropica, Burkholderia sp.
SpecBKH7Burkholderia caryophylli
SpecBKH70Burkholderia unamae
SpecBKH75Pandoraea apista, P. norimbergensis, P. pnomenusa, P. pulmonicola, P. sputorum, Pandoraea sp., Burkholderia sp.
SpecBKH76Candidatus Burkholderia calva (AY277697)
SpecBKH77Candidatus Burkholderia calva (AY277697)
SpecBKH8Burkholderia caryophylli
SpecBKH82Pandoraea pulmonica, Burkholderia sp., uncultured eubacterium WD285
SpecBKH83Pandoraea apista, Pandoraea sp., Burkholderia sp. JB1 (X92188)
SpecBKH84Pandoraea pnomenusa, P. pulmonicola, Pandoraea sp., Burkholderia sp. MN 182.2 (AJ313026)
SpecBKH87Burkholderia andropogonis, Burkholderia sp.,
SpecBKH88Burkholderia caryophylli, Burkholderia sp.
SpecBKH89Burkholderia cenocepacia LMG 12615 (AF265235), B. cepacia, Burkholderia sp., M2-K6, M2-K81,
SpecBKH9Burkholderia caryophylli
SpecBKH90Burkholderia ambifaria, B. cepacia, B. pyrrocinia, B. stabilis (T) (AF148554), B. vietnamiensis, Burkholderia sp., M2-K5, M2-K9, M2-K11, M2-K13, M2-K72, M3-K3
SpecBKH93Burkholderia gladioli, Burkholderia sp.
SpecBKH97Burkholderia pseudomallei C7532 amp C6756 (AJ616911 amp AJ616912)
SpecBKH98Burkholderia pseudomallei C7532 amp C6756 (AJ616911 amp AJ616912)
SpecBKH99Burkholderia cepacia (M22518)
SpecBkhcaryBurkholderia caryophylli
SpecBkhglatBurkholderia glathei
SpecBkhglumBurkholderia glumae
SpecBkhgram1Burkholderia graminis
SpecBkhgram2Burkholderia graminis
SpecBkhubo1Burkholderia ubonensis
SpecBkhvandBurkholderia plantarii
SpecBktrop1Burkholderia tropica
SpecBktrop2Burkholderia tropica
SpecBktrop3Burkholderia tropica
SpecBktrop4Burkholderia tropica
SpecBurcepBurkholderia cepacia
SpecMallei 2Burkholderia pseudomallei
SpecMallei 3Burkholderia pseudomallei
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