| Bacillus-PhyloChip | Low-density oligonucleotide microarray (microchip) for identifying strains of five closely related bacilli (Bacillus anthracis, Bacillus cereus, Bacillus mycoides, Bacillus medusa and Bacillus subtilis). The microarray contains a hierarchical set of 30 oligonucleotide probes targeting the 16S ribosomal RNA of these bacilli at multiple levels of specificity (approximate taxonomic ranks of domain, kingdom, order, genus and species). |
| SRP-PhyloChip | Low-density oligonucleotide microarray (microchip) for identification of all recognized lineages of sulfate-reducing prokaryotes (SRPs). The microarray contains 142 different 18-mer oligonucleotide probes of parallel and hierarchical specificity (multiple probe concept) targeting the 16S rRNA (gene) of all bacterial and archeal SRPs. |
| Human Intestinal Bacteria Chip | Low-density oligonucleotide microarray (microchip) for detection of 20 intestinal bacterial species (Bacteroides thetaiotaomicron, B. vulgatus, B. fragilis, B. distasonis, Clostridium clostridiiforme, C. leptum, Fusobacterium prausnitzii, Peptostreptococcus productus, Ruminococcus obeum, R. bromii, R. callidus, R. albus, Bifidobacterium longum, B. adolescentis, B. infantis, Eubacterium biforme, E. aerofaciens, Lactobacillus acidophilus, Escherichia coli, Enterococcus faecium) in human fecal samples. Each species is targeted by three 40-mer oligonucleotide probes (total 60 probes). |
| RHC-PhyloChip | Low-density oligonucleotide microarray (microchip) for identification of all recognized and yet-uncultivated members of the betaproteobacterial order Rhodocyclales (RHCs). The microarray contains 18-mer 16S rRNA-targeted oligonucleotide probes of parallel and hierarchical specificity (multiple probe concept). |
| ECC-PhyloChip | Low-density oligonucleotide microarray (microchip) for detection and differentiation of 19 Enterococcus species. The microarray contains 41 16S or 23S rRNA-targeted oligonucleotide probes (18-mer) of parallel and hierarchical specificity designed according to the multiple probe concept. |
| Nitrifier-Microarray | Gel-based oligonucleotide microarray (microchip) for detection of nitrifying bacteria. The microarray contains 26 16S rRNA-targeted oligonucleotide probes at varying levels of specificity. |
| Freshwater Sediment-Microarray | Oligonucleotide microarray (microchip) for characterization of bacterial communities in freshwater sediments. The microarray contains 70 16S rRNA-targeted oligonucleotides of parallel and hierarchical specificity designed according to the multiple probe concept. |
| Compost Community-Microarray | Oligonucleotide microarray (microchip) for characterization of bacterial communities in compost. The microarray contains 56 16S rRNA-targeted oligonucleotides of parallel and hierarchical specificity designed according to the multiple probe concept. |
| Burkholderia-Phylochip | Low-density oligonucleotide microarray (microchip) for detection and differentiation of members of the genus Burkholderia. The microarray contains 132 16S rRNA-targeted oligonucleotide probes (mostly 18-mer) of parallel and hierarchical specificity designed according to the multiple probe concept. |
| Soil microbial community phylochip | 16S rRNA microarray (phylochip) for analysis and comparison of microbial community composition of soils. The microarray is contains 575 probes targeting bacterial diversity at various taxonomic levels from phyla to species. |
| Actinomycetes microarray | 16S rRNA-based taxonomic microarray that targets key actinomycetes at the genus level. It contains 113 actinomycete 16S rRNA probes, corresponding to 55 of the 202 described
genera. |
| 16S rRNA-based taxonomic microarray | 16S rRNA-based taxonomic microarray for assessing bacterial community diversity. The prototype microarray is composed of 122 probes that target bacteria at various taxonomic levels from phyla to species (mostly Alphaproteobacteria). |
| 16S rRNA-based taxonomic microarray | 16S rRNA-based taxonomic microarray for assessing bacterial community diversity. The microarray is composed of 170 probes that target bacteria at various taxonomic levels from phyla to species (mostly proteobacteria). |
| 16S rRNA-based taxonomic microarray | 16S rRNA-based taxonomic microarray for assessing bacterial community diversity. The microarray is composed of 170 probes that target bacteria at various taxonomic levels from phyla to species (mostly proteobacteria). |
| Taxonomic 16S rRNA microarray | Taxonomic 16S rRNA microarray for comparison of rhizobacterial community composition. The microarray contains 1033 probes and targets 19 bacterial phyla. |
| Fish Pathogen 16S Microarray | Oligonucleotide-based microarray used to simultaneously screen for 15 fish pathogens. |
