List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
HoAc1402 S-*-HoAc-1402-a-A-18 bacteria of relevance in wastewater treatment, higher taxonomic levels 16S Acidobacteria, activated sludge clones A22, A34, H3, H44, S6
LS_subd8_SGB1223 L-*-Sub8–1223-a-A-18 - 23S Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5 (LS_LKC11_kan6), clone ZC6, G. fermentans, H. foetida
LS_subd8_SGB1420 L-*-Sub8-1420-a-A-18 - 23S Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5, LS_LKC11_kan6, clone ZC6, G. fermentans, H. foetida,
Acidocella1 - 16S Acidocella/Acidiphilium
Acidomonas2 - 16S Acidomonas methanolica
WJ20646 extremophilic microbes 16S acidophilic gamma-Proteobacteria WJ2 and PK51 and some acid mine drainage clones
KO 202 S-*-Aaacc-0443-a-A-19 - 16S Acidovorax avenae avenae/cattleyae/citrulli
KO 201 S-*-Aaacc-0644-a-A-18 - 16S Acidovorax avenae subsp. avenae/cattleyae/citrulli
Acave1 - 16S Acidovorax aveneae cluster
Acave3 - 16S Acidovorax aveneae cluster
Acave4 - 16S Acidovorax aveneae cluster
ACI208 aerobic hydrogen-oxidizing ("Knallgas") bacteria 16S Acidovorax spp.
ACA652 (ACA23A) S-G-Acin-0652-a-A-18 bacteria of relevance in wastewater treatment, bacteria of medical or hygienical relevance 16S Acinetobacter
KO 233 S-S-Alwo-0574-a-A-18 - 16S Acinetobacter lwoffii, Sphingobacterium
ACAC bacteria of medical or hygienical relevance 16S Actinobacillus actinomycetemcomitans
HGC236 higher taxonomic levels 16S Actinobacteria
HGC69A (HGC) L-P-Grps-1901-a-A-18 higher taxonomic levels 23S Actinobacteria (high G+C Gram-positive bacteria)
Actino-221 S-S-Actino-221-a-A-18 bacteria of relevance in wastewater treatment 16S Actinobacterial PAO
Actino-658 S-S-Actino-658-a-A-18 bacteria of relevance in wastewater treatment 16S Actinobacterial PAO
Actiba1 - 16S Actinobaculum
Actiba3 - 16S Actinobaculum
Acm3 - 16S Actinomadura
Acm6 - 16S Actinomadura
ActiA4 - 16S Actinomyces
ActiB4 - 16S Actinomyces