List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Strepto19 - 16S Streptococcus
Ira3 - 16S Azospirillum irakense
Corallc9 - 16S Some Corallococcus
Chlorb III 441 S-*-Chlorb III-0441-a-A-20 - 16S phylotype affiliated with the familiy Chlorobiaceae (DGGE bands 25s, 26s)
Pomo828 S-*-Pomo-0828-a-A-18 - 16S Polaromonas vacuolata
OTU16-1350 S-*-OTU16-1350-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones H4, H6, H29, S7
DFMIa641 S-*-DfmIa-0641-a-A-18 sulfate-reducing microbes 16S Desulfotomaculum spp. (cluster Ia)
EUK1209 higher taxonomic levels, eukaryotes 18S Eukarya
g458 symbiotic microbes 16S secondary endosymbiont of Planococcus citri
KO 218 S-S-Saur-0069-a-A-19 - 16S Staphylococcus aureus, S. haemolyticus
Ccat - 26S Candida catenulata
Strepto27 - 16S Streptococcus
Ama2 - 16S Azospirillum amazonense
Anmxb5 - 16S Anaeromyxobacter
DEN67 - 16S Methanol-utilizing denitrifying cluster group A closely related to the obligate methylotrophs Methylobacillus and Methylophilus in the order Methylophilales
Gor596 S-G-Gor-0596-a-A-22 bacteria of relevance in wastewater treatment 16S Gordonia (Gordona)
OTU17-66 S-*-OTU17-0066-a-A-20 bacteria of relevance in wastewater treatment 16S activated sludge clones H46, S43
DFMIb726 S-*-DfmIb-0726-a-A-18 sulfate-reducing microbes 16S Desulfotomaculum spp., Sporotomaculum spp. (cluster Ib)
EUK309R S-D-Euca-0309-a-A-17 higher taxonomic levels, eukaryotes 18S Eukarya
g630 symbiotic microbes 16S secondary endosymbiont of Planococcus citri
KO 219 S-*-HpylA-0162-a-A-24 - 16S Helicobacter pylori, H. nemestrinae, H. cetorum, H. tursipssae, H. heilmanii
Cint - 26S Candida intermedia
Tab993 - 16S Thermoanaerobacter
Rhodo2 - 16S Rhodospirillum
Anmxb6 - 16S Anaeromyxobacter