List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Eco09i — bacteria of medical or hygienical relevance 23S Enterococcus columbae ✘ ✘
Hyo1210 L-S-S.hyo-1210-a-A-19 animal and human associated microbiota, intestinal microbiota 23S Brachyspira hyodysenteriae ✘ ✘
ECO1167 (ECO 45A) — bacteria of medical or hygienical relevance 23S Escherichia coli ✔ ✘
Pilosi1405 L-S-S.pilo-1405-a-A-20 animal and human associated microbiota, intestinal microbiota 23S Serpulina pilosicoli (Brachyspira pilosicoli) ✘ ✘
Ecoce58 — bacteria of medical or hygienical relevance 23S Enterococcus cecorum, E. columbae ✘ ✘
Ps — - 23S Pseudomonas spp. ✔ ✘
Edfm57 — bacteria of medical or hygienical relevance 23S Enterococcus durans, E. faecium, E. mundtii ✘ ✘
Ppu — - 23S Pseudomonas spp. ✔ ✘
Pce — bacteria of medical or hygienical relevance 23S Burkholderia spp. ✔ ✘
Edi38 — bacteria of medical or hygienical relevance 23S Enterococcus dispar ✘ ✘
Cp3 — bacteria of medical or hygienical relevance 23S Clostridium perfringens ✘ ✘
Eduhi09 — bacteria of medical or hygienical relevance 23S Enterococcus durans, E. hirae ✘ ✘
Efa54 — bacteria of medical or hygienical relevance 23S Enterococcus faecalis ✘ ✘
Efl58i — bacteria of medical or hygienical relevance 23S Enterococcus flavescens ✘ ✘
PseaerA — bacteria of medical or hygienical relevance 23S Pseudomonas aeruginosa ✔ ✘
Ega09 — bacteria of medical or hygienical relevance 23S Enterococcus gallinarum ✘ ✘
Emu58 — bacteria of medical or hygienical relevance 23S Enterococcus mundtii ✘ ✘
Enc38i — bacteria of medical or hygienical relevance 23S Enterococcus spp., Melisococcus spp., Tetragenococcus spp., Vagococcus spp. ✘ ✘
GAM42a_T1038_G1031 — higher taxonomic levels 23S Representatives of the Xanthomonas group ✔ ✘
GAM42a_T1038 — higher taxonomic levels 23S Representatives of the Xanthomonas group ✔ ✘
Era58 — bacteria of medical or hygienical relevance 23S Enterococcus raffinosus ✘ ✘
GAM42a_A1041_A1040 — higher taxonomic levels 23S Representatives of the Xanthomonas group and the Alphaproteobacteria, Brevundimonas diminuta ✔ ✘
Esa09 — bacteria of medical or hygienical relevance 23S Enterococcus saccharolyticus ✘ ✘
Esa38 — bacteria of medical or hygienical relevance 23S Enterococcus asini, E. saccharolyticus ✘ ✘
Amx1900 L-*-Amx-1900-a-A-21 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 23S anaerobic ammonium-oxidizing bacteria, Candidatus `Brocadia anammoxidansapos and Candidatus `Kuenenia stuttgartiensisapos ✔ ✘