List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
PV5 — eukaryotes 18S Paraphysomonas vestita (Chrysophyceae) ✔ ✘
Ooeni — - 16S Oenococcus oeni ✔ ✘
DEN1454 — - 16S Acetate-denitrifying cluster ✔ ✘
Nsm156 S-G-Nsm-0155-a-A-19 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosomonas spp., Nitrosococcus mobilis ✔ ✘
405_Pro — phototrophic bacteria 16S Prochlorococcus (Cyanophyceae) ✔ ✘
Pdamn — - 16S Pediococcus damnosus ✔ ✘
FB648 — - 16S Thioturbo danicus and strain DK4 ✔ ✘
Nso1225 S-F-bAOB-1224-a-A-20 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria ✔ ✘
181_ProHLI — phototrophic bacteria 16S Prochlorococcus HLI (Cyanophyceae) ✔ ✘
Pparv — - 16S Pediococcus parvulus ✔ ✘
FB741 — - 16S Thioturbo danicus and strain DK4 ✔ ✘
Nso190 S-F-bAOB-0189-a-A-19 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria ✔ ✘
645_ProHLI — phototrophic bacteria 16S Prochlorococcus HLI (Cyanophyceae) ✔ ✘
Urobe63a S-*-Urobe-0063-a-A-20 bacteria of medical or hygienical relevance 16S uncultured Ruminococcus obeum-like bacteria ✔ ✘
GNS934 — - 16S Chloroflexi sponge cluster I ✔ ✘
FB842 — - 16S Strain DK4 ✔ ✘
Nsv443 — bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosospira spp. ✔ ✘
645_ProHLII — phototrophic bacteria 16S Prochlorococcus HLII (Cyanophyceae) ✔ ✘
Urobe63b S-*-Urobe-0063-b-A-20 bacteria of medical or hygienical relevance 16S uncultured Ruminococcus obeum-like bacteria ✔ ✘
POR1130 — - 16S Candidate phylum “Poribacteria” ✔ ✘
Rotcl1 — - 16S Cluster related to Methanosaeta concilii ✔ ✘
Ntcoc84 S-*-Ntcoc-84-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrococcus mobilis ✔ ✘
DSM213 S-G-Dsm-0213-a-A-18 sulfate-reducing microbes 16S Desulfomicrobium ✔ ✘
1445_ProNATL — phototrophic bacteria 16S Prochlorococcus LL (Cyanophyceae) ✔ ✘
CFX1238 — extremophilic microbes, phototrophic bacteria 16S Chloroflexus ✔ ✘