List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Lfer66 animal and human associated microbiota, intestinal microbiota 16S Lactobacillus fermentum
Tbm1282 S-G-Tbm-1282-a-A-18 extremophilic microbes 16S most of Thermoanaerobacterium sp.
gam1-1246 animal and human associated microbiota, intestinal microbiota 16S “Candidatus Gilliamella apicola” or Gamma-1 (symbiotic Gammaproteobacteria phylotype in honey bee)
RHGA702 S-S-Nsgar-702-a-A-18 extremophilic microbes 16S “Candidatus Nitrososphaera gargensis”
Cps-1414 S-S-Cps-1414-a-A-18 bacteria of medical or hygienical relevance 16S “Chlamydophila psittaci” group including C. felis, C. abortus, and C. caviae
Cps-1353 S-S-Cps-1353-a-A-18 bacteria of medical or hygienical relevance 16S “Chlamydophila psittaci” group including C. felis, C. abortus, and C. caviae
CPla-1 animal and human associated microbiota, intestinal microbiota 16S „Termite planctomycete cluster 1“
CPla-2 animal and human associated microbiota, intestinal microbiota 16S „Termite planctomycete cluster 2“
CPla-3 animal and human associated microbiota, intestinal microbiota 16S „Termite planctomycete cluster 2“
Tet3-654 S-S-Tet3-654-a-A-18 - 16S 3 Uncultured Tetrasphaera
Usporo489 - 16S a group of unclassified Clostridiales related to Sporobacter
Am445 S-F-aMtr-0445-a-A-28 methylotrophic bacteria 16S a-Methanotrophs
Am976 S-F-aMtr-0976-a-A-20 methylotrophic bacteria 16S a-Methanotrophs
SymAf576 - 16S A. fragilis symbiont
SymAf1272 - 16S A. fragilis symbiont
DEN124 denitrifying (nitrate-reducing) bacteria, bacteria of relevance in wastewater treatment 16S Acetate-denitrifying cluster
DEN581 denitrifying (nitrate-reducing) bacteria, bacteria of relevance in wastewater treatment 16S Acetate-denitrifying cluster
DEN444 - 16S Acetate-denitrifying cluster
DEN1454 - 16S Acetate-denitrifying cluster
DEN220 - 16S Acetate-denitrifying cluster and some members of the Comamonadaceae family
DEN220a - 16S Acetate-denitrifying cluster and some members of the Rhodocyclaceae family
DEN441 - 16S Acetate-denitrifying cluster and some members of the Rhodocyclaceae family
Ace2 - 16S Acetobacter
Aceti1 - 16S Acetobacter aceti
Aceto3B - 16S Acetobacteraceae