122 probes found.
| Probe name | Full name (Alm et al.) | Category | Target rRNA | Specificity | FISH | Primer |
|---|---|---|---|---|---|---|
| Fprau0645 | S-*-Fprau-0645-a-A-23 | animal and human associated microbiota, intestinal microbiota | 16S | Feacalibacterium (Fusobacterium) prausnitzii and relatives | ✔ | ✘ |
| Mcs487 | S-S-Mcs-0487-a-A-21 | animal and human associated microbiota, intestinal microbiota | 16S | Mucispirillum spp. | ✔ | ✘ |
| Mcs547 | S-S-Mcs-0547-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | Mucispirillum spp. | ✔ | ✘ |
| MUC-1437 | S-G-Akk-1437-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | Akkermansia muciniphila | ✔ | ✘ |
| Bacid1 | — | animal and human associated microbiota, intestinal microbiota | 16S | B. acidifaciens Group 1 | ✔ | ✘ |
| Bacid2 | — | animal and human associated microbiota, intestinal microbiota | 16S | B. acidifaciens Group 2 | ✘ | ✘ |
| Bacid3 | — | animal and human associated microbiota, intestinal microbiota | 16S | B. acidifaciens Group 3 | ✔ | ✘ |
| Bot | — | animal and human associated microbiota, intestinal microbiota | 16S | B. ovatus and B. thetaiotaomicron | ✔ | ✘ |
| Bova | — | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides ovatus | ✔ | ✘ |
| Bthe | — | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides thethaiotaomicron | ✔ | ✘ |
| Buni | — | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides uniformis | ✔ | ✘ |
| Bcac | — | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides caccae | ✔ | ✘ |
| Bovat 1028 | S-S-Bovat-1028-a-A-19 | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides ovatus | ✔ | ✘ |
| Bdist 1025 | S-S-Bdist-1025-a-A-19 | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides distasonis (Parabacteroides distasonis) | ✔ | ✘ |
| Bputre 698 | S-S-Bputre-698-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides putredinis (Alistipes putredinis) | ✔ | ✘ |
| Efs | — | animal and human associated microbiota, intestinal microbiota | 23S | Enterococcus faecalis FAIR E 92 | ✔ | ✘ |
| LPLANG | — | animal and human associated microbiota, intestinal microbiota | 16S | Lactobacillus plantarum 423 | ✔ | ✘ |
| LSAL | — | animal and human associated microbiota, intestinal microbiota | 16S | Lactobacillus salvirius 241 | ✔ | ✘ |
| Lba | — | animal and human associated microbiota, intestinal microbiota | 23S | Lactobacillus acidophilus (cluster A1) | ✔ | ✘ |
| Lbg | — | animal and human associated microbiota, intestinal microbiota | 23S | Lactobacillus gasseri (cluster B1) | ✔ | ✘ |
| Lbj | — | animal and human associated microbiota, intestinal microbiota | 23S | Lactobacillus johnsonii (cluster B2) | ✔ | ✘ |
| LSPotu9468-999 | S-*-Lsp-999-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | Lachnospiraceae OTU_9468 | ✔ | ✘ |
| LSPotu9468-1259 | S-*-Lsp-1259-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | Lachnospiraceae OTU_9468 | ✔ | ✘ |
| Bacto1080 | S-*-Bacto-1080-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides, Prevotella, and Porphyromonas | ✘ | ✘ |
| Enter1432 | S-G-Enter-1432-a-A-15 | animal and human associated microbiota, intestinal microbiota | 16S | enteric group (Enterobacteriales) | ✘ | ✘ |