122 probes found.
| Probe name | Full name (Alm et al.) | Category | Target rRNA | Specificity | FISH | Primer |
|---|---|---|---|---|---|---|
| Esab1467 | S-S-Esab-1467-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Eubacterium saburreum | ✘ | ✘ |
| Eram997 | S-S-Eram-0997-a-A18 | animal and human associated microbiota, intestinal microbiota | 16S | Eubacterium ramulus | ✘ | ✘ |
| Erec207 | S-S-Erec-0207-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Eubacterium rectale sp. strain A1-86 | ✘ | ✘ |
| beta-572 | — | animal and human associated microbiota, intestinal microbiota | 16S | Candidatus Snodgrassella alvi or Beta (symbiotic Neisseriaceae phylotype in honey bee) | ✔ | ✘ |
| COR653 | S-*-Cor-0653-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Coriobacterium group (Coriobacterium and Collinsella) | ✔ | ✘ |
| ATO291 | S-*-Ato-0291-a-A-17 | animal and human associated microbiota, intestinal microbiota | 16S | Atopobium cluster | ✔ | ✘ |
| Erec482 | S-*-Erec-0482-a-A-19 | animal and human associated microbiota, intestinal microbiota | 16S | most of the Clostridium coccoides-Eubacterium rectale group (Clostridium cluster XIVa and XIVb) | ✔ | ✘ |
| Hyo1210 | L-S-S.hyo-1210-a-A-19 | animal and human associated microbiota, intestinal microbiota | 23S | Brachyspira hyodysenteriae | ✘ | ✘ |
| Pilosi209 | S-S-S.pilo-0209-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Serpulina pilosicoli (Brachyspira pilosicoli) | ✘ | ✘ |
| Pilosi1405 | L-S-S.pilo-1405-a-A-20 | animal and human associated microbiota, intestinal microbiota | 23S | Serpulina pilosicoli (Brachyspira pilosicoli) | ✘ | ✘ |
| Sym_Stau_303 | — | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroidales clone Candidatus Vestibaculum illigatum | ✔ | ✘ |
| Bif228 | S-G-Bif-228-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Bifidobacteria | ✔ | ✘ |
| Alsym16S | S-G-Burk-0642-a-A-19 | animal and human associated microbiota, intestinal microbiota | 16S | Burkholderia (Alydidae gut symbionts) | ✔ | ✘ |
| MCP52 | — | animal and human associated microbiota, intestinal microbiota | 16S | Mollicutes | ✔ | ✘ |
| CPla-1 | — | animal and human associated microbiota, intestinal microbiota | 16S | „Termite planctomycete cluster 1“ | ✔ | ✘ |
| CPla-2 | — | animal and human associated microbiota, intestinal microbiota | 16S | „Termite planctomycete cluster 2“ | ✔ | ✘ |
| CPla-3 | — | animal and human associated microbiota, intestinal microbiota | 16S | „Termite planctomycete cluster 2“ | ✔ | ✘ |
| fir5-575 | — | animal and human associated microbiota, intestinal microbiota | 16S | Firm-5 (symbiotic Firmicutes phylotype in honey bee) | ✔ | ✘ |
| Faecali698 | — | animal and human associated microbiota, intestinal microbiota | 16S | Faecalibacterium and relatives | ✔ | ✘ |
| Clep866 | S-*-Clep-0866-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | members of the Clostridium leptum subgroup | ✔ | ✘ |
| Rcal733 | S-*-Rcal-0733-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | members of the Ruminococcus callidus species | ✔ | ✘ |
| Cvir1414 | S-*-Cvir-1414-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Clostridium viride cluster | ✔ | ✘ |
| Edes635 | S-*-Edes-0635-a-A-18 | animal and human associated microbiota, intestinal microbiota | 16S | Eubacterium desmolans species | ✔ | ✘ |
| Bfrag 998 | S-S-Bfrag-0998-a-A-20 | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides fragilis | ✔ | ✘ |
| Bvulg 1017 | S-S-Bvulg-1017-a-A-21 | animal and human associated microbiota, intestinal microbiota | 16S | Bacteroides vulgatus | ✔ | ✘ |