List of probes and primers

198 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
21N — bacteria of relevance in wastewater treatment 16S Eikelboom type 021N strain II-26 ✔ ✘
A33-587 S-*-A33-0587-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clone A33 ✘ ✘
ACA652 (ACA23A) S-G-Acin-0652-a-A-18 bacteria of relevance in wastewater treatment, bacteria of medical or hygienical relevance 16S Acinetobacter ✔ ✘
ACCBA443 S-*-Accba-0443-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Candidatus Accumulibacter cluster ✘ ✘
ACCBA455 S-*-Accba-0455-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Candidatus Accumulibacter cluster ✘ ✘
ACCBA651 S-*-Accba-0651-a-A-18 bacteria of relevance in wastewater treatment 16S most bacteria of the Candidatus Accumulibacter phosphatis cluster ✘ ✘
ACCBA846 S-*-Accba-846-a-A-18 bacteria of relevance in wastewater treatment 16S Most members of the Candidatus Accumulibacter cluster ✘ ✘
actino-1011 S-S-HGC-1011-a-A-19 bacteria of relevance in wastewater treatment 16S Tetrasphaera japonica, enhanced biological phosphorus removal clone Ebpr19, Ebpr20 (Actinobacteria) ✔ ✘
Actino-221 S-S-Actino-221-a-A-18 bacteria of relevance in wastewater treatment 16S Actinobacterial PAO ✔ ✘
Actino-658 S-S-Actino-658-a-A-18 bacteria of relevance in wastewater treatment 16S Actinobacterial PAO ✔ ✘
ALBO577 — bacteria of medical or hygienical relevance, bacteria of relevance in wastewater treatment 16S Alcaligenes, Bordetella and close relatives ✔ ✘
AMAR 839 S-G-AMAR-0839-a-A-22 bacteria of relevance in wastewater treatment 16S Amaricoccus spp. ✔ ✘
Amx1900 L-*-Amx-1900-a-A-21 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 23S anaerobic ammonium-oxidizing bacteria, Candidatus `Brocadia anammoxidansapos and Candidatus `Kuenenia stuttgartiensisapos ✔ ✘
Amx368 S-*-Amx-0368-a-A-18 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S all ANAMMOX bacteria ✔ ✘
Amx820 S-*-Amx-0820-a-A-22 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S anaerobic ammonium-oxidizing bacteria, Candidatus `Brocadia anammoxidansapos and Candidatus `Kuenenia stuttgartiensisapos ✔ ✘
Apr820 S-*-Apr-0820-a-A-21 anaerobic ammonium-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Cand. “Anammoxoglobus propionicus” ✔ ✘
ATDe442 S-*-ATDe-0442-a-A-18 bacteria of relevance in wastewater treatment 16S Activated sludge clones A33, H25, H30, H35, S3, S10, and S23 of the Azoarcus-Thauera-Denitromonas lineage ✘ ✘
ATDe467 S-*-ATDe-0467-a-A-18 bacteria of relevance in wastewater treatment 16S Activated sludge clones A33, H25, H30, H35, S3, S10, and S23 of the Azoarcus-Thauera-Denitromonas lineage ✘ ✘
ATDe830 S-*-ATDe-0830-a-A-18 bacteria of relevance in wastewater treatment 16S Activated sludge clones A33, H25, H30, H35, S3, S10, and S23 of the Azoarcus-Thauera-Denitromonas lineage ✘ ✘
AZA1006 S-*-Aza-1006-a-A-18 bacteria of relevance in wastewater treatment, dinitrogen-fixing bacteria, phototrophic bacteria 16S Most members of the Azoarcus cluster ✘ ✘
b-AO233 — bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria ✘ ✘
Ban162 (B. anam.) S-S-Ban-0162(B. anam.)-a-A-18 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S Candidatus Brocadia anammoxidans ✔ ✘
Bete-1250 S-*-Bete-1250-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Bacteroidetes ✔ ✘
Bete-1419 S-*-Bete-1419-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Bacteroidetes ✔ ✘
Bfu613 — anaerobic ammonium-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Candidatus “Brocadia fulgida” ✔ ✘