198 probes found.
| Probe name | Full name (Alm et al.) | Category | Target rRNA | Specificity | FISH | Primer |
|---|---|---|---|---|---|---|
| OTU1-1415 | S-*-OTU1-1415-a-A-20 | bacteria of relevance in wastewater treatment | 16S | Zoogloea ramigera, activated sludge clones A16, H7, H10, H11, H13, H22, H27. H40, S21 | ✔ | ✘ |
| OTU14-129 | S-*-OTU14-0129-a-A-20 | bacteria of relevance in wastewater treatment | 16S | Hyphomicrobium spp., activated sludge clones A7b, A39 | ✔ | ✘ |
| OTU16-1027 | S-*-OTU16-1027-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones H4, H6, H29, S7 | ✔ | ✘ |
| OTU16-1350 | S-*-OTU16-1350-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones H4, H6, H29, S7 | ✔ | ✘ |
| OTU17-66 | S-*-OTU17-0066-a-A-20 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones H46, S43 | ✔ | ✘ |
| OTU2-132 (ATDe132) | S-*-ATDe-0132-a-A-18 | bacteria of relevance in wastewater treatment | 16S | Activated sludge clones A33, H25, H30, H35, S3, S10, and S23 of the Azoarcus-Thauera-Denitromonas lineage | ✔ | ✘ |
| OTU2-467 | S-*-OTU2-0467-a-A-20 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones A33, H25, H30, H35, S3, S10, S23 | ✔ | ✘ |
| OTU25to31-1406 | S-*-OTU25to31-1406-a-A-18 | bacteria of relevance in wastewater treatment, higher taxonomic levels | 16S | some Anaerolineae | ✔ | ✘ |
| OTU26-650 | S-*-OTU26-0650-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones A11b, A30, H1, H19 | ✔ | ✘ |
| OTU28-1346 | S-*-OTU28-1346-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones H39, S41 | ✔ | ✘ |
| STEBA1426 | S-*-Steba-1426-a-A-18 | bacteria of relevance in wastewater treatment | 16S | Some members of the Sterolibacterium lineage | ✔ | ✘ |
| OTU31-656 | S-*-OTU31-0656-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones H8, S9 | ✔ | ✘ |
| OTU32-208 | S-*-OTU32-0208-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones A31, S47 | ✔ | ✘ |
| OTU32-630 | S-*-OTU32-0630-a-A-18 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones A31, S47 | ✔ | ✘ |
| OTU3-445 | S-*-OTU3-0445-a-A-20 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones A13, H12, H20, H23, S28, S40 | ✔ | ✘ |
| OTU43/44-360 | S-*-OTU43/44-0360-a-A-18 | bacteria of relevance in wastewater treatment, higher taxonomic levels | 16S | Acidobacteria group a, activated sludge clones A22, A34, H3 | ✔ | ✘ |
| OTU45-720 | S-*-OTU45-0720-a-A-20 | bacteria of relevance in wastewater treatment | 16S | activated sludge clones H44 and S6, soil clone C105, soil clone 11-25, Antarctic lake ice clone LB3-30 | ✔ | ✘ |
| OTU4-645 | S-*-OTU4-0645-a-A-18 | bacteria of relevance in wastewater treatment, dinitrogen-fixing bacteria, aerobic hydrogen-oxidizing ("Knallgas") bacteria | 16S | Alcaligenes latus, activated sludge clones A2, A26b | ✔ | ✘ |
| OTU6-178 | S-*-OTU6-0178-a-A-18 | bacteria of relevance in wastewater treatment, denitrifying (nitrate-reducing) bacteria | 16S | Brachymonas denitrificans, activated sludge clone A6b | ✔ | ✘ |
| PS-1 | — | bacteria of relevance in wastewater treatment | 16S | Leptothrix spp., Sphaerotilus natans ATCC 29329 | ✘ | ✘ |
| PSP-6 | — | bacteria of relevance in wastewater treatment | 16S | Leptothrix discophora SP-6, L. cholodnii CCM1827, Leptothrix sp. strain NC-1 | ✘ | ✘ |
| ZAL | — | bacteria of relevance in wastewater treatment | 16S | Zoogloea ramigera ATCC 19623 | ✔ | ✘ |
| ZBE | — | bacteria of relevance in wastewater treatment | 16S | Zoogloea ramigera ATCC 25935 | ✔ | ✘ |
| ZRA23a (ZRA,ZOGLO647) | S-*-Zoglo-0647-a-A-18 | bacteria of relevance in wastewater treatment | 16S | Most members of the Zoogloea lineage, not Z. resiniphila | ✔ | ✘ |
| NEU | S-*-Nsm-0651-a-A-18 | bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria | 16S | Most halophilic and halotolerant Nitrosomonas spp. | ✔ | ✘ |