List of probes and primers

14 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
DSBAC355 sulfate-reducing microbes, syntrophic microbes 16S most Desulfobacterales and Syntrophobacterales
S.bry181 S-S-S.bry-0181-a-A-21 syntrophic microbes 16S Syntrophomonas bryantii
S.sap181 S-S-S.sap-0181-a-A-20 syntrophic microbes 16S Syntrophomonas sapovorans
S.wol180 S-S-S.wol-0180-a-A-21 syntrophic microbes 16S Syntrophomonas wolfei subsp. wolfei, S. wolfei strain LYB
SYN835 sulfate-reducing microbes, syntrophic microbes 16S Syntrophobacter, Desulforhabdus
Synm126 S-G-Synm-0126-a-A-19 syntrophic microbes 16S Syntrophomonas sapovorans, S. wolfei subsp. wolfei, S. wolfei strain LYB
Synm700 S-F-Synm-0700-a-A-23 syntrophic microbes 16S mesophilic members of the family Syntrophomonadaceae
SYBAC986 S-*-Sybac-0986-a-A-18 sulfate-reducing microbes, syntrophic microbes 16S Desulfovirga spp., Desulforhabdus spp., Syntrophobacter spp.
SYBAC697 S-*-Sybac-0697-a-A-18 sulfate-reducing microbes, syntrophic microbes 16S Desulforhabdus spp., Desulfovirga spp., Syntrophobacter spp.
SYBAC587a S-*-Sybac-0587-a-A-18 sulfate-reducing microbes, syntrophic microbes 16S Uncultured Syntrophobacter-related bacteria (Schlöppnerbrunnen I soil clones SbISybac13, 15, and 19 Schlöppnerbrunnen II soil clones SbIISybac12-1, 1-2, 3-2, and 13-2)
SYBAC587b S-*-Sybac-0587-b-A-18 sulfate-reducing microbes, syntrophic microbes 16S Uncultured Syntrophobacter-related bacteria (Schlöppnerbrunnen I soil clones SbISybac16 Schlöppnerbrunnen II soil clones SbIISybac25-1, 6-2, and 8-2)
Ntspa685 S-G-Ntspa-0685-a-A-22 nitrite-oxidizing bacteria, syntrophic microbes 16S Nitrospira moscoviensis, Nitrospira marina and 710-9 clone
Ntspa454 S-*-Ntspa-0454-a-A-19 nitrite-oxidizing bacteria, syntrophic microbes 16S Nitrospira moscoviensis 710-9 clone
Ih820 S-*-Ih820-0820-a-A-18 syntrophic microbes, sulfate-reducing microbes 16S Desulfotomaculum subcluster Ih (Pelotomaculum and Cryptanaerobacter)