List of probes and primers

76 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
OcraDEL1 — sulfate-reducing microbes, symbiotic microbes 16S Deltaproteobacterial symbiont 1 of Olavius crassitunicatus ✔ ✘
OcraDEL2 — sulfate-reducing microbes, symbiotic microbes 16S Deltaproteobacterial symbiont 2 of Olavius crassitunicatus ✔ ✘
OcraDEL3 — sulfate-reducing microbes, symbiotic microbes 16S Deltaproteobacterial symbiont 3 of Olavius crassitunicatus ✔ ✘
Cribseq S-S-Crib-0064-a-A-20 symbiotic microbes 16S Criblamydia sequanensis ✔ ✘
TG1-Rsd17 — symbiotic microbes 16S specific for phylotypes Rs-D17 amp RsTG1 in candidate phylum Termite Group 1 ✘ ✘
TG1-HsTG1-248 — symbiotic microbes 16S specific for phylotype HsTG1 in candidate phylum Termite Group 1 ✘ ✘
TG1-T-287 — symbiotic microbes 16S most members of subphylum 1 of candidate phylum Termite Group 1 ✘ ✘
TG1-HsTG3-193 — symbiotic microbes 16S specific for phylotype HsTG3 in candidate phylum Termite Group 1 ✘ ✘
TG1-RsD95-123 — symbiotic microbes 16S specific for phylotypes Rs-D95, RsDe11, RsDr18 in candidate phylum Termite Group 1 ✘ ✘
TG1-RsD43-64 — symbiotic microbes 16S specific for phylotypes Rs-D43, RsPgL2-11, RsPgO2-18 in candidate phylum Termite Group ✘ ✘
TG1-GfMT-287 — symbiotic microbes 16S specific for phylotype GfMT5-8 in candidate phylum Termite Group 1 ✘ ✘
TG1End1023T1 — symbiotic microbes 16S Endomicrobia phylotypes ZnTc-1, HsTc-1, RsTG1 ✔ ✘
TG1End1027 — symbiotic microbes 16S Most Endomicrobia lineages ✘ ✘
TG1-TriG1-Hsj — symbiotic microbes 16S Endomicrobia HsTc-1 ✔ ✘
TG1-Joe-Kf — symbiotic microbes 16S Endomicrobia phylotype KfJe-1 ✔ ✘
TG1-Dev-Nca — symbiotic microbes 16S Endomicrobia phylotype NcDv-1 ✔ ✘
Oilv/OcraGAM1 — symbiotic microbes 16S Olavius ilvae / O. crassitunicatus Gamma 1 symbiont ✔ ✘
Oalg/OilvGAM3 — symbiotic microbes 16S Olavius algarvensis / O. ilvae Gamma 3 symbionts ✔ ✘
OilvDEL1 — symbiotic microbes 16S Olavius ilvae Delta 1 symbiont ✔ ✘
Oalg/OilvDEL3 — symbiotic microbes 16S Olavius algarvensis/ O. ilvae Delta 3 symbiont ✔ ✘
OalgDEL4 — symbiotic microbes 16S Olavius algarvensis Delta 4 symbiont ✔ ✘
SPIRO — symbiotic microbes 16S Olavius algarvensis / O. crassitunicatus /O. loisae spirochete symbionts ✔ ✘
Bnix-64 — symbiotic microbes 16S Candidatus Endonucleobacter bathymodioli ✘ ✘
Bnix-643 — symbiotic microbes 16S Candidatus Endonucleobacter bathymodioli ✘ ✘
Bnix-1249 — symbiotic microbes 16S Candidatus Endonucleobacter bathymodioli ✘ ✘