List of probes and primers

76 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
AcRic1196 S-*-AcEnd-1196-a-A-18 symbiotic microbes 16S Rickettsia-related endosymbionts of Acanthamoeba strains UWC8 and UWC36 ✔ ✘
1109TY1R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1109TY2R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1109TY3R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1174TY1R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1174TY2R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1174TY3R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
prV2 — symbiotic microbes 16S uncultured alphaproteobacterium ✘ ✘
prV6 — symbiotic microbes 16S uncultured alphaproteobacterium ✘ ✘
prV8 — symbiotic microbes 16S uncultured alphaproteobacterium ✘ ✘
Aph1180 S-G-Aph-1180-a-A-18 symbiotic microbes 16S Candidatus Amoebophilus asiaticus ✔ ✘
Rhabdo S-S-RhaC-0992-a-A symbiotic microbes 16S Candidatus Rhabdochlamydia porcellionis ✔ ✘
Rick_527 S-F-Rick-0527-a-A-16 symbiotic microbes 16S members of the Rickettsiaceae family Caedibacter caryophilus ✘ ✘
Rick_1442 S-F-Rick-1442-a-A-18 symbiotic microbes 16S members of the Rickettsiaceae family ✘ ✘
BuCc — symbiotic microbes 16S Buchnera aphidicola Cc ✘ ✘
SCc — symbiotic microbes 16S S-Symbiont R-Type ✘ ✘
WCc — symbiotic microbes 16S Wolbachia ✘ ✘
UV7-763 S-St-UV7-763-a-A-18 symbiotic microbes 16S Parachlamydia sp. UV-7 ✔ ✘
TG1-Ta-Rsa S-S-E.tri-1023-a-A-20 symbiotic microbes 16S Candidatus Endomicrobium trichonymphae ✔ ✘
TG1-Pv-Rsa S-S-E.pyr-1023-a-A-20 symbiotic microbes 16S Candidatus Endomicrobium pyrsonymphae ✔ ✘
Poly_862 S-G-Poly-0862-a-A-18 symbiotic microbes 16S Polynucleobacter necessarius-cluster ✘ ✘
Proca438 S-G-Proca-0438-a-A-18 symbiotic microbes 16S Candidatus Procabacter sp. ✔ ✘
Actino837 — symbiotic microbes 16S specific for phylotype Rs-Q42/RsW01-017 in Propionibacteriaceae ✘ ✘
ZNS1439 S-*-Znsym-1439-a-A-20 symbiotic microbes 16S Zoothamnium niveum ectosymbiont ✔ ✘
ZNS196 S-*-Znsym-0196-a-A-19 symbiotic microbes 16S Zoothamnium niveum ectosymbiont ✔ ✘