List of probes and primers

76 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
CC23a — symbiotic microbes 16S Caedibacter caryophilus (C. caryophyla) and other Caedibacter-related endosymbionts of Acanthamoeba spp. ✘ ✘
PcaeC9 S-S-PcaeC9-217-a-A-18 symbiotic microbes 16S Candidatus Paracaedibacter acanthamoebae (endosymbiont of Acanthamoeba sp. UWC9) ✔ ✘
PcaeE39 S-S-PcaeE339-217-a-A-18 symbiotic microbes 16S Candidatus Paracaedibacter symbiosus (endosymbiont of Acanthamoeba sp. UWE39) ✔ ✘
CaeAc998 S-S-CaeAc-998-a-A-18 symbiotic microbes 16S Candidatus Caedibacter acanthamoebae (endosymbiont of Acanthamoeba polyphaga HN-3) ✔ ✘
Ctaenio-998 S-S-Ctaenio-998-a-A-18 symbiotic microbes 16S Caedibacter taeniospiralis ✔ ✘
b91 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
b162 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
b886 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
b1273 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
g80 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
g458 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
g630 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
g1273 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
Cap1428 — symbiotic microbes 16S Candidatus capitivii acidiprotistae ✔ ✘
OalgGAM445 — symbiotic microbes, S-oxidizing (sulfur-oxidizing) bacteria 16S Gammaproteobacterial, sulfur-oxidizing symbiont of Olavius algarvensis ✔ ✘
OalgDEL136 — symbiotic microbes, sulfate-reducing microbes 16S Deltaproteobacterial symbiont of Olavius algarvensis ✔ ✘
I. leu. (IleuSYM581) — symbiotic microbes 16S Gammaproteobacterial symbiont of Inanidrilus leukodermatus ✔ ✘
O. tan. (OtanSYM581) — symbiotic microbes 16S Gammaproteobacterial symbiont of Olavius tantalus ✔ ✘
TTI-732 — symbiotic microbes 16S Treponema cluster I ✔ ✘
Dev1-486 — symbiotic microbes 16S ectosymbiotic spirochetes on Devescovina sp. and Stephanonympha sp. ✔ ✘
Dev14-486 — symbiotic microbes 16S ectosymbiotic spirochetes on Devescovina sp. and Stephanonympha sp. ✔ ✘
Dev14-Tp652 — symbiotic microbes 16S ectosymbiotic spirochetes on Devescovina sp. and Stephanonympha sp. ✔ ✘
Oxy8-Tp444 — symbiotic microbes 16S ectosymbiotic spirochetes on Oxymonas sp. and Stephanonympha sp. ✔ ✘
Oxy26-Tp1281 — symbiotic microbes 16S ectosymbiotic spirochetes on Oxymonas sp. and Stephanonympha sp. ✔ ✘
AcRic90 S-*-AcEnd-0090-a-A-18 symbiotic microbes 16S Rickettsia-related endosymbionts of Acanthamoeba strains UWC8 and UWC36 ✔ ✘