List of probes and primers

20 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
CFX1238 — extremophilic microbes, phototrophic bacteria 16S Chloroflexus ✔ ✘
RFX1238 — extremophilic microbes, phototrophic bacteria 16S Roseiflexus assemblage ✔ ✘
GALTS0084 — extremophilic microbes 16S acid mine drainage clones related to Gallionella ferruginea ✔ ✘
BSC0459 — extremophilic microbes 16S acid mine drainage beta-proteobacterial clones ✔ ✘
LGC0355 — extremophilic microbes 16S Firmicutes (Low G+C gram-positive bacteria) ✔ ✘
ATT0223 — extremophilic microbes, S-oxidizing (sulfur-oxidizing) bacteria 16S Acidithiobacillus thiooxidans ✔ ✘
Arglo32 S-O-Arglo-0032-a-A-20 extremophilic microbes 16S Archaeoglobales ✔ ✘
Aqui1197 S-O-Aqui-1197-a-A-20 extremophilic microbes 16S Aquificales ✔ ✘
Tcoc164 S-O-Tcoc-0164-a-A-20 extremophilic microbes 16S Thermococcales ✔ ✘
Meiot836 — extremophilic microbes 16S Meiothermus sp. ✔ ✘
FMR0732 — extremophilic microbes, iron- and manganese-oxidizing bacteria 16S some iron-oxidising acidophilic Actinobacteria and some acid mine drainage clones ✔ ✘
ABl0199 — extremophilic microbes 16S some acidophilic Acidobacteriaceae and an acid mine drainage clone ✔ ✘
ABl1002 — extremophilic microbes 16S some acidophilic Acidobacteriaceae ✔ ✘
TM1G0138 — extremophilic microbes, iron- and manganese-oxidizing bacteria 16S Group 1 Thiomonas species ✔ ✘
TM2G0138 — extremophilic microbes, iron- and manganese-oxidizing bacteria 16S Group 2 Thiomonas species ✔ ✘
WJ20646 — extremophilic microbes 16S acidophilic gamma-Proteobacteria WJ2 and PK51 and some acid mine drainage clones ✔ ✘
RHGA702 S-S-Nsgar-702-a-A-18 extremophilic microbes 16S “Candidatus Nitrososphaera gargensis” ✔ ✘
Tbm1282 S-G-Tbm-1282-a-A-18 extremophilic microbes 16S most of Thermoanaerobacterium sp. ✔ ✘
Tbmthsacc184 S-S-Tbmthsacc-0184-a-A-18 extremophilic microbes 16S Thermoanaerobacterium thermosaccharolyticum ✔ ✘
ACIDO228 — extremophilic microbes 16S Acidobacteria subdivision 1 ✔ ✘