List of probes and primers

194 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
ACA652 (ACA23A) S-G-Acin-0652-a-A-18 bacteria of relevance in wastewater treatment, bacteria of medical or hygienical relevance 16S Acinetobacter ✔ ✘
ALBO34a — bacteria of medical or hygienical relevance 23S Bordetella spp., Alcaligenes spp. (sensu stricto) ✔ ✘
Bcv13b — bacteria of medical or hygienical relevance 23S Burkholderia vietnamensis, B. cepacia ✔ ✘
Chls-0523 S-O-Chls-0523-a-A-18 higher taxonomic levels, bacteria of medical or hygienical relevance 16S Chlamydiales ✔ ✘
DDK3 — bacteria of medical or hygienical relevance 16S Treponema sp. DDKL-3 ✘ ✘
DDK4 — bacteria of medical or hygienical relevance 16S Treponema phagedenis, DDKL-4 ✘ ✘
Eampr18 — bacteria of medical or hygienical relevance 23S Enterococcus avium, E. malodoratus, E. pseudoavium, E. raffinosus ✘ ✘
Eamprs09 — bacteria of medical or hygienical relevance 23S Enterococcus avium, E. malodoratus, E. pseudoavium, E. raffinosus, E. sulfureus ✘ ✘
Eas09 — bacteria of medical or hygienical relevance 23S Enterococcus asini ✘ ✘
Eav58i — bacteria of medical or hygienical relevance 23S Enterococcus avium ✘ ✘
Eca18i — bacteria of medical or hygienical relevance 16S Enterococcus casseliflavus ✘ ✘
Ecafl09i — bacteria of medical or hygienical relevance 23S Enterococcus casseliflavus, E. flavescens ✘ ✘
ECC460 (ECC 461) — bacteria of medical or hygienical relevance 16S Enterococcus columbae, Enterococcus cecorum ✘ ✘
Ecc461 — bacteria of medical or hygienical relevance 16S Enterococcus columbae, E. cecorum ✘ ✘
Eacdfg57 — bacteria of medical or hygienical relevance 23S Enterococcus casseliflavus, E. flavescens, E. asini, E. dispar, E. gallinarum ✘ ✘
Ece09 — bacteria of medical or hygienical relevance 23S Enterococcus cecorum ✘ ✘
ECE83 (6B) — bacteria of medical or hygienical relevance 16S Enterococcus cecorum ✘ ✘
ECE91 (ECE 92) — bacteria of medical or hygienical relevance 16S Enterococcus cecorum ✘ ✘
Ece92 — bacteria of medical or hygienical relevance 16S Enterococcus cecorum ✘ ✘
Ecf459 — bacteria of medical or hygienical relevance 16S Enterococcus casseliflavus, E. flavescens, E. dispar, E. pseudoavium ✘ ✘
Ecg191 — bacteria of medical or hygienical relevance 16S Enterococcus casseliflavus, E. flavescens ✘ ✘
ECG192 (ECG 191) — bacteria of medical or hygienical relevance 16S Enterococcus gallinarum, Enterococcus flavescens, Enterococcus casseliflavus ✘ ✘
Eco09i — bacteria of medical or hygienical relevance 23S Enterococcus columbae ✘ ✘
ECO1167 (ECO 45A) — bacteria of medical or hygienical relevance 23S Escherichia coli ✔ ✘
Ecoce58 — bacteria of medical or hygienical relevance 23S Enterococcus cecorum, E. columbae ✘ ✘