List of probes and primers

24 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
NB1000 S-G-Nbac-1000-a-A-15 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrobacter spp. ✘ ✘
NIT3 S-G-Nbac-1035-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrobacter spp. ✔ ✘
Ntcoc84 S-*-Ntcoc-84-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrococcus mobilis ✔ ✘
Ntspa1026 S-*-Ntspa-1026-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira moscoviensis, activated sludge clones A4 and A11 ✔ ✘
Ntspa662 S-G-Ntspa-662-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S genus Nitrospira ✔ ✘
Ntspa712 S-*-Ntspa-712-a-A-21 higher taxonomic levels, nitrite-oxidizing bacteria 16S most members of the phylum Nitrospirae ✔ ✘
Ntspn693 S-*-Ntspn-693-a-A-20 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospina gracilis ✔ ✘
NTSPA714 S-*-Ntspa-714-a-A-18 higher taxonomic levels, nitrite-oxidizing bacteria 16S Phylum Nitrospira, not Thermodesulfovibrio islandicus ✘ ✘
NSR826 — bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira moscoviensis, freshwater Nitrospira spp. ✔ ✘
NSR1156 — bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira moscoviensis, freshwater Nitrospira spp. ✔ ✘
NSR447 — bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira spp. ✔ ✘
Ntspa685 S-G-Ntspa-0685-a-A-22 nitrite-oxidizing bacteria, syntrophic microbes 16S Nitrospira moscoviensis, Nitrospira marina and 710-9 clone ✔ ✘
Ntspa454 S-*-Ntspa-0454-a-A-19 nitrite-oxidizing bacteria, syntrophic microbes 16S Nitrospira moscoviensis 710-9 clone ✘ ✘
Ntcoc206 S-*-Ntcoc-206-a-A-18 nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrococcus mobilis ✘ ✘
Ntspn994 S-*-Ntspn-994-a-A-18 nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrospina gracilis ✘ ✘
Ntspa1431 S-*-Ntspa-1431-a-A-18 nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Sublineage I of the genus Nitrospira ✔ ✘
Ntspa1151 S-*-Ntspa-1151-a-A-20 nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Sublineage II of the genus Nitrospira ✔ ✘
Nsr1145 S-*-Nsr-1145-a-A-18 nitrite-oxidizing bacteria 16S Nitrospira spp. ✘ ✘
Nsr989 S-S-Nsr-0989-a-A-18 nitrite-oxidizing bacteria 16S Nitrospira marina ✘ ✘
Nsn227 S-*-Nsn-0227-a-A-18 nitrite-oxidizing bacteria 16S Nitrospina gracilis ✘ ✘
Ncc214 S-S-Ncc-0214-a-A-18 nitrite-oxidizing bacteria 16S Nitrococcus mobilis ✘ ✘
Nspmar62 — nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrospira marina-related clones ✔ ✘
Ntlc439 S-G-Ntlc-439-a-A-18 nitrite-oxidizing bacteria 16S Nitrolancetus hollandicus ✔ ✘
Ntlc804 S-G-Ntlc-804-a-A-18 nitrite-oxidizing bacteria 16S Nitrolancetus hollandicus ✔ ✘