187 probes found.
Probe name | Full name (Alm et al.) | Category | Target rRNA | Specificity | FISH | Primer |
---|---|---|---|---|---|---|
DSV1154 | — | sulfate-reducing microbes | 16S | Desulfovibrio alcoholivorans, D. fructosivorans, D. burkinensis, rice field isolate F1-7b and R-SucA1 | ✘ | ✘ |
DSV1292 | S-*-Dsv-1292-a-A-18 | sulfate-reducing microbes | 16S | Some Desulfovibrio and Bilophila wadsworthia | ✔ | ✘ |
DSV214 | — | sulfate-reducing microbes | 16S | Most Desulfomicrobium | ✔ | ✘ |
DSV407 | — | sulfate-reducing microbes | 16S | Few Desulfovibrionaceae, Desulfohalobiaceae, and Desulfonatronumaceae | ✔ | ✘ |
Dsv683 | S-*-Dsv-0683-a-A-22 | sulfate-reducing microbes | 16S | Desulfovibrionaceae, metal reducers | ✘ | ✘ |
687(DSV687) | S-F-Dsv-0687-a-A-16 | sulfate-reducing microbes, iron- and manganese-reducing bacteria | 16S | Most Desulfovibrionales (excluding Lawsonia) and many Desulfuromonales | ✔ | ✘ |
DSV698 | — | sulfate-reducing microbes | 16S | Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis | ✔ | ✘ |
Dtm(a)229 | S-*-Dtm(a)-0229-a-A-18 | sulfate-reducing microbes | 16S | Desulfotomaculum cluster Ia | ✘ | ✘ |
Dtm(bcd)230 | S-*-Dtm(bcd)-0230-a-A-18 | sulfate-reducing microbes | 16S | Many Desulfotomaculum cluster I and other Firmicutes | ✔ | ✘ |
Dtm(be)152 | S-*-Dtm(be)-0152-a-A-20 | sulfate-reducing microbes | 16S | Desulfotomaculum cluster Ib and Ie | ✘ | ✘ |
Dtm(c)428 | S-*-Dtm(c)-0428-a-A-19 | sulfate-reducing microbes | 16S | Desulfotomaculum cluster Ic | ✘ | ✘ |
Dtm(cd)216 | S-*-Dtm(cd)-0216-a-A-19 | sulfate-reducing microbes | 16S | Desulfotomaculum cluster Ic and Id | ✘ | ✘ |
Dtm229 | S-G-Dtm-0229-a-A-18 | sulfate-reducing microbes | 16S | Desulfotomaculum cluster I and other Firmicutes | ✔ | ✘ |
SRB385 (SRB) | S-*-Srb-0385-a-A-18 | sulfate-reducing microbes | 16S | Most Desulfovibrionales and other Bacteria | ✔ | ✘ |
SRB385Db | — | sulfate-reducing microbes | 16S | Desulfobacterales, Desulfuromonales, Syntrophobacterales, Myxococcales, and other Bacteria | ✔ | ✘ |
Sval428 | — | sulfate-reducing microbes | 16S | Some Desulfobulbaceae (excluding most Desulfobulbus | ✔ | ✘ |
SYN835 | — | sulfate-reducing microbes, syntrophic microbes | 16S | Syntrophobacter, Desulforhabdus | ✘ | ✘ |
DSM194 | S-G-Dsm-0194-a-A-18 | sulfate-reducing microbes | 16S | Desulfomicrobium spp., Desulfobacterium macestii | ✘ | ✘ |
DSM213 | S-G-Dsm-0213-a-A-18 | sulfate-reducing microbes | 16S | Desulfomicrobium | ✔ | ✘ |
DSHRE830 | S-S-Dsh.re-0830-a-A-18 | sulfate-reducing microbes | 16S | Desulfohalobium retbaense | ✘ | ✘ |
DSHRE995 | S-S-Dsh.re-0995-a-A-18 | sulfate-reducing microbes | 16S | Desulfohalobium retbaense | ✘ | ✘ |
DSHRE1243 | S-S-Dsh.re-1243-a-A-18 | sulfate-reducing microbes | 16S | Desulfohalobium retbaense | ✘ | ✘ |
DFMI227a | S-*-DfmI-0227-a-A-18 | sulfate-reducing microbes | 16S | Desulfotomaculum putei, Dfm. gibsoniae, Dfm. geothermicum, Dfm. thermosapovorans, Dfm. thermoacidovorans, Dfm. thermobenzoicum, Dfm. thermoacetoxidans, Dfm. australicum, Dfm. kuznetsovii, Dfm. thermocisternum, Dfm. luciae, Sporotomaculum hydroxybenzoicum | ✘ | ✘ |
DFMI227b | S-*-DfmI-0227-b-A-18 | sulfate-reducing microbes | 16S | Desulfotomaculum aeronauticum, Dfm. nigrificans, Dfm. reducens, Dfm. ruminis, Dfm. sapomandens, Dfm. halophilum | ✘ | ✘ |
DFMI210 | S-*-DfmI-0210-a-A-18 | sulfate-reducing microbes | 16S | some Desulfotomaculum spp. of clusters Ic and Id | ✘ | ✘ |